Publications
Sargent JL, Milano A, Bhattacharyya S, Varga J, Connolly MK, Chang HY, Whitfield ML
A TGFbeta-Responsive Gene Signature Is Associated with a Subset of Diffuse Scleroderma with Increased Disease Severity.
J Invest Dermatol 2009 Oct 8; ():
PMID: 19812599 [PubMed - as supplied by publisher]
Chandriani S, Frengen E, Cowling VH, Pendergrass SA, Perou CM, Whitfield ML, Cole MD
A core MYC gene expression signature is prominent in basal-like breast cancer but only partially overlaps the core serum response.
PLoS One 2009 Aug 19; 4(8):e6693
PMID: 19690609 [PubMed - in process]
Milks MW, Cripps JG, Lin H, Wang J, Robinson RT, Sargent JL, Whitfield ML, Gorham JD
The role of Ifng in alterations in liver gene expression in a mouse model of fulminant autoimmune hepatitis.
Liver Int 2009 Oct; 29(9):1307-15
PMID: 19490417 [PubMed - indexed for MEDLINE]
Varga J, Whitfield ML
Transforming growth factor-beta in systemic sclerosis (scleroderma).
Front Biosci (Schol Ed) 2009 Jun 1; 1():226-35
PMID: 19482698 [PubMed - in process]
Chung L, Fiorentino DF, Benbarak MJ, Adler AS, Mariano MM, Paniagua RT, Milano A, Connolly MK, Ratiner BD, Wiskocil RL, Whitfield ML, Chang HY, Robinson WH
Molecular framework for response to imatinib mesylate in systemic sclerosis.
Arthritis Rheum 2009 Feb; 60(2):584-91
PMID: 19180499 [PubMed - indexed for MEDLINE]
Beyrouthy MJ, Alexander KE, Baldwin A, Whitfield ML, Bass HW, McGee D, Hurt MM
Identification of G1-regulated genes in normally cycling human cells.
PLoS One 2008; 3(12):e3943
PMID: 19079774 [PubMed - indexed for MEDLINE]
Milano A, Pendergrass SA, Sargent JL, George LK, McCalmont TH, Connolly MK, Whitfield ML
Molecular subsets in the gene expression signatures of scleroderma skin.
PLoS One 2008 Jul 16; 3(7):e2696
PMID: 18648520 [PubMed - indexed for MEDLINE]
Sargent JL, Milano A, Connolly MK, Whitfield ML
Scleroderma gene expression and pathway signatures.
Curr Rheumatol Rep 2008 Jul; 10(3):205-11
PMID: 18638428 [PubMed - indexed for MEDLINE]
Andrew AS, Jewell DA, Mason RA, Whitfield ML, Moore JH, Karagas MR
Drinking-water arsenic exposure modulates gene expression in human lymphocytes from a U.S. population.
Environ Health Perspect 2008 Apr; 116(4):524-31
PMID: 18414638 [PubMed - indexed for MEDLINE]
Emmons J, Townley-Tilson WH, Deleault KM, Skinner SJ, Gross RH, Whitfield ML, Brooks SA
Identification of TTP mRNA targets in human dendritic cells reveals TTP as a critical regulator of dendritic cell maturation.
RNA 2008 May; 14(5):888-902
PMID: 18367721 [PubMed - indexed for MEDLINE]
Pendergrass SA, Whitfield ML, Gardner H
Understanding systemic sclerosis through gene expression profiling.
Curr Opin Rheumatol 2007 Nov; 19(6):561-7
PMID: 17917536 [PubMed - indexed for MEDLINE]
Townley-Tilson WH, Pendergrass SA, Marzluff WF, Whitfield ML
Genome-wide analysis of mRNAs bound to the histone stem-loop binding protein.
RNA 2006 Oct; 12(10):1853-67
PMID: 16931877 [PubMed - indexed for MEDLINE]
Cowling VH, Chandriani S, Whitfield ML, Cole MD
A conserved Myc protein domain, MBIV, regulates DNA binding, apoptosis, transformation, and G2 arrest.
Mol Cell Biol 2006 Jun; 26(11):4226-39
PMID: 16705173 [PubMed - indexed for MEDLINE]
Whitfield ML, George LK, Grant GD, Perou CM
Common markers of proliferation.
Nat Rev Cancer 2006 Feb; 6(2):99-106
PMID: 16491069 [PubMed - indexed for MEDLINE]
Jones SB, DePrimo SE, Whitfield ML, Brooks JD
Resveratrol-induced gene expression profiles in human prostate cancer cells.
Cancer Epidemiol Biomarkers Prev 2005 Mar; 14(3):596-604
PMID: 15767336 [PubMed - indexed for MEDLINE]
Whitfield ML, Kaygun H, Erkmann JA, Townley-Tilson WH, Dominski Z, Marzluff WF
SLBP is associated with histone mRNA on polyribosomes as a component of the histone mRNP.
Nucleic Acids Res 2004; 32(16):4833-42
PMID: 15358832 [PubMed - indexed for MEDLINE]
Novoradovskaya N, Whitfield ML, Basehore LS, Novoradovsky A, Pesich R, Usary J, Karaca M, Wong WK, Aprelikova O, Fero M, Perou CM, Botstein D, Braman J
Universal Reference RNA as a standard for microarray experiments.
BMC Genomics 2004 Mar 9; 5(1):20
PMID: 15113400 [PubMed - indexed for MEDLINE]
Murray JI, Whitfield ML, Trinklein ND, Myers RM, Brown PO, Botstein D
Diverse and specific gene expression responses to stresses in cultured human cells.
Mol Biol Cell 2004 May; 15(5):2361-74
PMID: 15004229 [PubMed - indexed for MEDLINE]
Zhao H, Whitfield ML, Xu T, Botstein D, Brooks JD
Diverse effects of methylseleninic acid on the transcriptional program of human prostate cancer cells.
Mol Biol Cell 2004 Feb; 15(2):506-19
PMID: 14617803 [PubMed - indexed for MEDLINE]
Whitfield ML, Finlay DR, Murray JI, Troyanskaya OG, Chi JT, Pergamenschikov A, McCalmont TH, Brown PO, Botstein D, Connolly MK
Systemic and cell type-specific gene expression patterns in scleroderma skin.
Proc Natl Acad Sci U S A 2003 Oct 14; 100(21):12319-24
PMID: 14530402 [PubMed - indexed for MEDLINE]
Zhao H, Hastie T, Whitfield ML, Borresen-Dale AL, Jeffrey SS
Optimization and evaluation of T7 based RNA linear amplification protocols for cDNA microarray analysis.
BMC Genomics 2002 Oct 30; 3(1):31
PMID: 12445333 [PubMed]
Allard P, Champigny MJ, Skoggard S, Erkmann JA, Whitfield ML, Marzluff WF, Clarke HJ
Stem-loop binding protein accumulates during oocyte maturation and is not cell-cycle-regulated in the early mouse embryo.
J Cell Sci 2002 Dec 1; 115(Pt 23):4577-86
PMID: 12415002 [PubMed - indexed for MEDLINE]
Whitfield ML, Sherlock G, Saldanha AJ, Murray JI, Ball CA, Alexander KE, Matese JC, Perou CM, Hurt MM, Brown PO, Botstein D
Identification of genes periodically expressed in the human cell cycle and their expression in tumors.
Mol Biol Cell 2002 Jun; 13(6):1977-2000
PMID: 12058064 [PubMed - indexed for MEDLINE]